Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs17059951 chr18:74539699 C/T 5.36E-5 178 25.47 25.52 18.63 KM Plot
PCPG rs17118403 chr12:56630067 C/T 9.68E-8 178 25.17 29.13 0.8 KM Plot
PCPG rs17118409 chr12:56630764 G/A 9.68E-8 178 25.17 29.13 0.8 KM Plot
PCPG rs17118431 chr12:56667100 A/G 1.09E-7 177 25.17 27.33 0.8 KM Plot
PCPG rs17118439 chr12:56667604 C/T 1.53E-5 178 2.73 29.13 25.35 KM Plot
PCPG rs17135499 chr16:1759794 C/T 4.68E-5 178 17.77 18.75 25.47 KM Plot
PCPG rs17135500 chr16:1759853 A/G 5.3E-5 176 25.47 18.75 17.77 KM Plot
PCPG rs17135502 chr16:1764942 T/C 6.54E-5 174 25.6 15.85 17.77 KM Plot
PCPG rs17135503 chr16:1777493 A/G 2.24E-11 170 25.17 27.27 4.52 KM Plot
PCPG rs17172272 chr7:36155691 T/C 0.000433 178 25.77 24.5 14.37 KM Plot
PCPG rs17172273 chr7:36168209 G/A 0.000452 176 25.87 24.37 14.37 KM Plot
PCPG rs17177891 chr16:89799950 C/T 0.000194 173 25.87 20.28 36.37 KM Plot
PCPG rs17182656 chr14:74351313 C/T 1.14E-5 175 25.28 28.3 10.43 KM Plot
PCPG rs17182675 chr14:74378805 A/G 1.16E-5 176 25.4 27.2 10.43 KM Plot
PCPG rs17182783 chr14:74571874 G/A 2.24E-5 176 25.4 27.43 10.3 KM Plot